Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pcdha11Q91Y19 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gm14494-201ENSMUST00000118786 435 ntBASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gm11594-201ENSMUST00000122313 162 ntBASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdha11Q91Y19 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Gm18246-201ENSMUST00000221023 728 ntBASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdha11Q91Y19 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdha11Q91Y19 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.05■□□□□ 0.16
Pcdha11Q91Y19 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms