Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha2Q91Y17 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha2Q91Y17 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Gm12008-201ENSMUST00000117791 755 ntBASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Gm15467-201ENSMUST00000120582 445 ntBASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha2Q91Y17 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Gm14494-201ENSMUST00000118786 435 ntBASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Gm5177-201ENSMUST00000183092 997 ntBASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha2Q91Y17 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha2Q91Y17 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms