Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdha9Q91Y11 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdha9Q91Y11 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gm1401-201ENSMUST00000122048 772 ntBASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gm27300-201ENSMUST00000184085 97 ntBASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gm27335-201ENSMUST00000184758 97 ntBASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdha9Q91Y11 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms