Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Gm10566-201ENSMUST00000086739 996 ntBASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb3Q91XZ7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm14716-201ENSMUST00000120138 718 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm27704-201ENSMUST00000185094 107 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Ank2-226ENSMUST00000189368 339 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.35■□□□□ 0.05
Pcdhb3Q91XZ7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Gm17808-201ENSMUST00000200859 894 ntBASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Gm18515-201ENSMUST00000219755 797 ntBASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb3Q91XZ7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms