Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb5Q91XZ5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb5Q91XZ5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb5Q91XZ5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb5Q91XZ5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb5Q91XZ5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Gm6973-201ENSMUST00000117080 721 ntBASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Gm10253-201ENSMUST00000194270 940 ntBASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb5Q91XZ5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Gm16026-204ENSMUST00000162652 683 ntBASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb5Q91XZ5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Gm25287-201ENSMUST00000103846 110 ntBASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Gm22918-201ENSMUST00000103855 110 ntBASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb5Q91XZ5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Mir7023-201ENSMUST00000185093 64 ntBASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb5Q91XZ5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms