Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sybu-209ENSMUST00000228639 4113 ntBASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdhga3Q91XY5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm12644-201ENSMUST00000119935 606 ntBASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm12497-201ENSMUST00000138778 237 ntBASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdhga3Q91XY5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhga3Q91XY5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Pcdhga3Q91XY5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pcdhga3Q91XY5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms