Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga4Q91XY4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Gm43514-201ENSMUST00000198852 424 ntBASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhga4Q91XY4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga4Q91XY4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga4Q91XY4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga4Q91XY4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.08■□□□□ 0
Pcdhga4Q91XY4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga4Q91XY4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Mir5131-201ENSMUST00000175426 93 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Gm19164-201ENSMUST00000210667 640 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 AV026068-213ENSMUST00000223675 1171 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga4Q91XY4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms