Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vsx1Q91V10 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.13■□□□□ 0.01
Vsx1Q91V10 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.13■□□□□ 0.01
Vsx1Q91V10 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Gm18246-201ENSMUST00000221023 728 ntBASIC15.13■□□□□ 0.01
Vsx1Q91V10 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vsx1Q91V10 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.12■□□□□ 0.01
Vsx1Q91V10 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Gm13223-201ENSMUST00000118609 747 ntBASIC15.12■□□□□ 0.01
Vsx1Q91V10 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.12■□□□□ 0.01
Vsx1Q91V10 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Gm5779-201ENSMUST00000218467 910 ntBASIC15.12■□□□□ 0.01
Vsx1Q91V10 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vsx1Q91V10 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.12■□□□□ 0.01
Vsx1Q91V10 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Gm24158-201ENSMUST00000175263 71 ntBASIC15.11■□□□□ 0.01
Vsx1Q91V10 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Gm19164-201ENSMUST00000210667 640 ntBASIC15.11■□□□□ 0.01
Vsx1Q91V10 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vsx1Q91V10 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Grk6-207ENSMUST00000225925 2769 ntBASIC15.1■□□□□ 0.01
Vsx1Q91V10 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Vsx1Q91V10 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms