Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm13615-201ENSMUST00000120242 1612 ntBASIC16.25■□□□□ 0.19
TraipQ8VIG6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TraipQ8VIG6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.24■□□□□ 0.19
TraipQ8VIG6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.24■□□□□ 0.19
TraipQ8VIG6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.24■□□□□ 0.19
TraipQ8VIG6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TraipQ8VIG6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm25287-201ENSMUST00000103846 110 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm22918-201ENSMUST00000103855 110 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm18737-201ENSMUST00000173594 937 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm44335-201ENSMUST00000196879 141 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm44297-201ENSMUST00000198304 141 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm44346-201ENSMUST00000198851 141 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Gm44872-201ENSMUST00000207864 420 ntBASIC16.23■□□□□ 0.19
TraipQ8VIG6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TraipQ8VIG6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.22■□□□□ 0.19
TraipQ8VIG6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TraipQ8VIG6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
TraipQ8VIG6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TraipQ8VIG6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms