Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cspg4Q8VHY0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm6415-201ENSMUST00000118488 348 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm17150-201ENSMUST00000165577 381 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm6218-201ENSMUST00000219812 628 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cspg4Q8VHY0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Gm27838-201ENSMUST00000184829 128 ntBASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Gm28630-201ENSMUST00000187806 498 ntBASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Gm3786-201ENSMUST00000202659 378 ntBASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cspg4Q8VHY0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Syt7-204ENSMUST00000223586 1344 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm14722-201ENSMUST00000118943 689 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Gm8515-201ENSMUST00000194852 576 ntBASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cspg4Q8VHY0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms