Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Gm11779-201ENSMUST00000118541 368 ntBASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Gm11594-201ENSMUST00000122313 162 ntBASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Gm12260-201ENSMUST00000122447 411 ntBASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Grk6-207ENSMUST00000225925 2769 ntBASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg1dQ8VE91 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg1dQ8VE91 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm8344-201ENSMUST00000119813 856 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm14140-201ENSMUST00000119999 995 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm6257-201ENSMUST00000163864 910 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm5682-201ENSMUST00000173402 505 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm5264-201ENSMUST00000190584 848 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg1dQ8VE91 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.17■□□□□ 0.02
Retreg1dQ8VE91 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms