Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ndc1Q8VCB1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm7787-201ENSMUST00000216858 688 ntBASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ndc1Q8VCB1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ndc1Q8VCB1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Gm6736-201ENSMUST00000166583 948 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Gm27300-201ENSMUST00000184085 97 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Gm27335-201ENSMUST00000184758 97 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Gm9682-201ENSMUST00000197505 556 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ndc1Q8VCB1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ndc1Q8VCB1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms