Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf8Q8VC56 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf8Q8VC56 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Gm7153-201ENSMUST00000117092 455 ntBASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 BC037039-201ENSMUST00000192003 2205 ntBASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rnf8Q8VC56 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.77□□□□□ -0.04
Rnf8Q8VC56 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Gm17971-201ENSMUST00000190239 806 ntBASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf8Q8VC56 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms