Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Gm15590-201ENSMUST00000078419 552 ntBASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpap2Q8VC34 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.78■□□□□ 0.28
Rpap2Q8VC34 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpap2Q8VC34 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Gm4899-201ENSMUST00000178708 719 ntBASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Gm7461-201ENSMUST00000058918 827 ntBASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpap2Q8VC34 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Rpap2Q8VC34 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Gm27628-201ENSMUST00000184911 107 ntBASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpap2Q8VC34 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpap2Q8VC34 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms