Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tmc1Q8R4P5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tmc1Q8R4P5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Gm25406-201ENSMUST00000157599 105 ntBASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Gm23547-201ENSMUST00000158210 271 ntBASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Birc2-201ENSMUST00000054878 378 ntBASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tmc1Q8R4P5 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm34391-201ENSMUST00000203706 907 ntBASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.71■□□□□ 0.59
Tmc1Q8R4P5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tmc1Q8R4P5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms