Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc58Q8R3Q6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gm10812-201ENSMUST00000099864 546 ntBASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc58Q8R3Q6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.77□□□□□ -0.2
Ccdc58Q8R3Q6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc58Q8R3Q6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc58Q8R3Q6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc58Q8R3Q6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc58Q8R3Q6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc58Q8R3Q6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc58Q8R3Q6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms