Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Nup58Q8R332 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup58Q8R332 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm12895-201ENSMUST00000122214 226 ntBASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.4■□□□□ 0.22
Nup58Q8R332 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.4■□□□□ 0.22
Nup58Q8R332 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm34391-201ENSMUST00000203706 907 ntBASIC16.4■□□□□ 0.22
Nup58Q8R332 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup58Q8R332 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Nup58Q8R332 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Nup58Q8R332 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.39■□□□□ 0.21
Nup58Q8R332 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.39■□□□□ 0.21
Nup58Q8R332 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup58Q8R332 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.39■□□□□ 0.21
Nup58Q8R332 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup58Q8R332 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Nup58Q8R332 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm13312-201ENSMUST00000119631 718 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm8825-201ENSMUST00000182565 998 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm4518-201ENSMUST00000182638 718 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.38■□□□□ 0.21
Nup58Q8R332 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup58Q8R332 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms