Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sf3a1Q8K4Z5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sf3a1Q8K4Z5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sf3a1Q8K4Z5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Gm4899-201ENSMUST00000178708 719 ntBASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sf3a1Q8K4Z5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.71■□□□□ 0.59
Sf3a1Q8K4Z5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Gm7787-201ENSMUST00000216858 688 ntBASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sf3a1Q8K4Z5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms