Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Gm27867-201ENSMUST00000184778 125 ntBASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk3Q8K3G5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Gm25406-201ENSMUST00000157599 105 ntBASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk3Q8K3G5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Gm10605-202ENSMUST00000183019 3198 ntBASIC13□□□□□ -0.33
Vrk3Q8K3G5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Gm7367-201ENSMUST00000057611 492 ntBASIC13□□□□□ -0.33
Vrk3Q8K3G5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vrk3Q8K3G5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vrk3Q8K3G5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms