Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC9.65□□□□□ -0.86
Cystm1Q8K353 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gm9013-201ENSMUST00000132939 882 ntBASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gm6728-201ENSMUST00000178117 1065 ntBASIC9.65□□□□□ -0.86
Cystm1Q8K353 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cystm1Q8K353 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.65□□□□□ -0.87
Cystm1Q8K353 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Cystm1Q8K353 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cystm1Q8K353 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.63□□□□□ -0.87
Cystm1Q8K353 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cystm1Q8K353 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Cystm1Q8K353 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms