Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cchcr1Q8K2I2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Gm17807-201ENSMUST00000186869 298 ntBASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cchcr1Q8K2I2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cchcr1Q8K2I2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cchcr1Q8K2I2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Cchcr1Q8K2I2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms