Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rftn2Q8CHX7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rftn2Q8CHX7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.21■□□□□ 0.18
Rftn2Q8CHX7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.21■□□□□ 0.18
Rftn2Q8CHX7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.21■□□□□ 0.18
Rftn2Q8CHX7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rftn2Q8CHX7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Gm9385-201ENSMUST00000117563 472 ntBASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rftn2Q8CHX7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Rprl2-201ENSMUST00000157150 290 ntBASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Gm20553-201ENSMUST00000204205 844 ntBASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.18■□□□□ 0.18
Rftn2Q8CHX7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms