Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab11fip3Q8CHD8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm16026-204ENSMUST00000162652 683 ntBASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm5312-201ENSMUST00000203728 547 ntBASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm18057-201ENSMUST00000208220 503 ntBASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rab11fip3Q8CHD8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Gm18889-201ENSMUST00000174284 929 ntBASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Mir6990-201ENSMUST00000183724 91 ntBASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab11fip3Q8CHD8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Gm44335-201ENSMUST00000196879 141 ntBASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Gm44297-201ENSMUST00000198304 141 ntBASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Gm44346-201ENSMUST00000198851 141 ntBASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab11fip3Q8CHD8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.7■□□□□ 0.74
Rab11fip3Q8CHD8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
Rab11fip3Q8CHD8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms