Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hist3h2bbQ8CGP0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hist3h2bbQ8CGP0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.62□□□□□ -0.55
Hist3h2bbQ8CGP0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms