Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smc4Q8CG47 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.82■□□□□ 0.6
Smc4Q8CG47 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.82■□□□□ 0.6
Smc4Q8CG47 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.82■□□□□ 0.6
Smc4Q8CG47 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Smc4Q8CG47 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smc4Q8CG47 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Mir1895-201ENSMUST00000122615 79 ntBASIC18.81■□□□□ 0.6
Smc4Q8CG47 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.81■□□□□ 0.6
Smc4Q8CG47 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.81■□□□□ 0.6
Smc4Q8CG47 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smc4Q8CG47 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.81■□□□□ 0.6
Smc4Q8CG47 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.8■□□□□ 0.6
Smc4Q8CG47 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.8■□□□□ 0.6
Smc4Q8CG47 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.8■□□□□ 0.6
Smc4Q8CG47 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.8■□□□□ 0.6
Smc4Q8CG47 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smc4Q8CG47 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms