Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim52Q8CDV4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gm27920-201ENSMUST00000183953 96 ntBASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim52Q8CDV4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Gm38225-201ENSMUST00000194001 393 ntBASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim52Q8CDV4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gm13015-201ENSMUST00000118674 204 ntBASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gm9824-201ENSMUST00000178707 561 ntBASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gm27622-201ENSMUST00000183779 60 ntBASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gm29541-201ENSMUST00000191351 678 ntBASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim52Q8CDV4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim52Q8CDV4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms