Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Gm7222-201ENSMUST00000117512 906 ntBASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc178Q8CDV0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Gm6257-201ENSMUST00000163864 910 ntBASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc178Q8CDV0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Sybu-209ENSMUST00000228639 4113 ntBASIC18.17■□□□□ 0.5
Ccdc178Q8CDV0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm27525-201ENSMUST00000184465 107 ntBASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gm5364-201ENSMUST00000216789 889 ntBASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc178Q8CDV0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms