Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Efs-202ENSMUST00000227037 2540 ntBASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cabcoco1Q8CDT7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cabcoco1Q8CDT7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cabcoco1Q8CDT7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cabcoco1Q8CDT7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cabcoco1Q8CDT7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cabcoco1Q8CDT7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms