Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.1■□□□□ 0.17
Q8CD60 Gm18489-201ENSMUST00000172565 551 ntBASIC16.1■□□□□ 0.17
Q8CD60 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.1■□□□□ 0.17
Q8CD60 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.1■□□□□ 0.17
Q8CD60 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.1■□□□□ 0.17
Q8CD60 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Q8CD60 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.1■□□□□ 0.17
Q8CD60 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Q8CD60 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Q8CD60 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.1■□□□□ 0.17
Q8CD60 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Q8CD60 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Q8CD60 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.09■□□□□ 0.17
Q8CD60 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.09■□□□□ 0.17
Q8CD60 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.09■□□□□ 0.17
Q8CD60 Gm27628-201ENSMUST00000184911 107 ntBASIC16.09■□□□□ 0.17
Q8CD60 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.09■□□□□ 0.17
Q8CD60 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Q8CD60 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Q8CD60 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Q8CD60 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Q8CD60 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q8CD60 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q8CD60 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.08■□□□□ 0.17
Q8CD60 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.08■□□□□ 0.17
Q8CD60 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Q8CD60 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Q8CD60 Gm11764-201ENSMUST00000120221 623 ntBASIC16.08■□□□□ 0.16
Q8CD60 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.08■□□□□ 0.16
Q8CD60 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Gm18733-201ENSMUST00000173950 856 ntBASIC16.08■□□□□ 0.16
Q8CD60 Gm4899-201ENSMUST00000178708 719 ntBASIC16.08■□□□□ 0.16
Q8CD60 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.08■□□□□ 0.16
Q8CD60 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Q8CD60 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Q8CD60 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Q8CD60 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Q8CD60 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.08■□□□□ 0.16
Q8CD60 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.07■□□□□ 0.16
Q8CD60 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 Gm10499-201ENSMUST00000174094 934 ntBASIC16.07■□□□□ 0.16
Q8CD60 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Q8CD60 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Q8CD60 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms