Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ufl1Q8CCJ3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Rprl2-201ENSMUST00000157150 290 ntBASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ufl1Q8CCJ3 Dancr-204ENSMUST00000132389 2347 ntBASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Gm18889-201ENSMUST00000174284 929 ntBASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ufl1Q8CCJ3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Prob1-201ENSMUST00000097619 3021 ntBASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ufl1Q8CCJ3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Mir6990-201ENSMUST00000183724 91 ntBASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ufl1Q8CCJ3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ufl1Q8CCJ3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ufl1Q8CCJ3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.27■□□□□ 0.51
Ufl1Q8CCJ3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ufl1Q8CCJ3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ufl1Q8CCJ3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ufl1Q8CCJ3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.26■□□□□ 0.51
Ufl1Q8CCJ3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ufl1Q8CCJ3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ufl1Q8CCJ3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms