Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf31Q8CCF0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm24513-201ENSMUST00000174964 138 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm27397-201ENSMUST00000184997 107 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm44492-201ENSMUST00000197012 141 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf31Q8CCF0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Gm14822-201ENSMUST00000122247 291 ntBASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Gm6736-201ENSMUST00000166583 948 ntBASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf31Q8CCF0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf31Q8CCF0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf31Q8CCF0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Prob1-201ENSMUST00000097619 3021 ntBASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.7■□□□□ 0.26
Prpf31Q8CCF0 Gm5177-201ENSMUST00000183092 997 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms