Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim9Q8C7M3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Sybu-209ENSMUST00000228639 4113 ntBASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.87■□□□□ 0.29
Trim9Q8C7M3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Gm10060-201ENSMUST00000212002 111 ntBASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Celf4-206ENSMUST00000224553 1729 ntBASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim9Q8C7M3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Gm28659-201ENSMUST00000188013 759 ntBASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim9Q8C7M3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms