Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm13453-201ENSMUST00000118708 357 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm9794-201ENSMUST00000202370 423 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a6Q8C6K9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Gm14722-201ENSMUST00000118943 689 ntBASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a6Q8C6K9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Mir7684-201ENSMUST00000183858 60 ntBASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Col6a6Q8C6K9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col6a6Q8C6K9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col6a6Q8C6K9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms