Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc90bQ8C3X2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc90bQ8C3X2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc90bQ8C3X2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc90bQ8C3X2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc90bQ8C3X2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Mir5130-201ENSMUST00000175160 84 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm37722-201ENSMUST00000193757 208 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc90bQ8C3X2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms