Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ska3Q8C263 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.41□□□□□ -0.1
Ska3Q8C263 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Ska3Q8C263 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ska3Q8C263 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ska3Q8C263 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.4□□□□□ -0.1
Ska3Q8C263 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ska3Q8C263 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ska3Q8C263 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ska3Q8C263 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.39□□□□□ -0.11
Ska3Q8C263 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Gm18489-201ENSMUST00000172565 551 ntBASIC14.39□□□□□ -0.11
Ska3Q8C263 Gm18733-201ENSMUST00000173950 856 ntBASIC14.39□□□□□ -0.11
Ska3Q8C263 Mir5131-201ENSMUST00000175426 93 ntBASIC14.39□□□□□ -0.11
Ska3Q8C263 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ska3Q8C263 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ska3Q8C263 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ska3Q8C263 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Ska3Q8C263 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Ska3Q8C263 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ska3Q8C263 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Ska3Q8C263 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.38□□□□□ -0.11
Ska3Q8C263 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ska3Q8C263 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms