Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sh3rf3Q8C120 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.97■□□□□ 0.15
Sh3rf3Q8C120 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Gm25990-201ENSMUST00000102440 86 ntBASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Gm6376-201ENSMUST00000209407 580 ntBASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf3Q8C120 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf3Q8C120 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Gm6089-201ENSMUST00000197666 938 ntBASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Gm5864-201ENSMUST00000202263 970 ntBASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf3Q8C120 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf3Q8C120 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms