Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.99□□□□□ -0.49
Chd9Q8BYH8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chd9Q8BYH8 Asic1-205ENSMUST00000228185 1818 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm9824-201ENSMUST00000178707 561 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm44608-201ENSMUST00000206827 855 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm42900-201ENSMUST00000197184 2167 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm15808-201ENSMUST00000119046 604 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm13350-201ENSMUST00000120519 479 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm27243-201ENSMUST00000183964 521 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm29787-201ENSMUST00000222129 849 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chd9Q8BYH8 Gm16198-201ENSMUST00000118766 670 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Gm9002-201ENSMUST00000178437 499 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Shd-206ENSMUST00000225145 998 ntBASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chd9Q8BYH8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chd9Q8BYH8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms