Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.01□□□□□ -0.33
Trank1Q8BV79 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trank1Q8BV79 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13□□□□□ -0.33
Trank1Q8BV79 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13□□□□□ -0.33
Trank1Q8BV79 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trank1Q8BV79 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trank1Q8BV79 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Gm4875-201ENSMUST00000118257 786 ntBASIC13□□□□□ -0.33
Trank1Q8BV79 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13□□□□□ -0.33
Trank1Q8BV79 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13□□□□□ -0.33
Trank1Q8BV79 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trank1Q8BV79 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm24543-201ENSMUST00000103867 82 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm20445-201ENSMUST00000061905 565 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm3436-201ENSMUST00000179930 840 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.99□□□□□ -0.33
Trank1Q8BV79 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trank1Q8BV79 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.98□□□□□ -0.33
Trank1Q8BV79 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trank1Q8BV79 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms