Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scfd1Q8BRF7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scfd1Q8BRF7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Gm43125-201ENSMUST00000201724 730 ntBASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scfd1Q8BRF7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scfd1Q8BRF7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scfd1Q8BRF7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Scfd1Q8BRF7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms