Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpsf4Q8BQZ5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gm4459-201ENSMUST00000118750 468 ntBASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpsf4Q8BQZ5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Rps4l-201ENSMUST00000071745 943 ntBASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpsf4Q8BQZ5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Gm6376-201ENSMUST00000209407 580 ntBASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf4Q8BQZ5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4Q8BQZ5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms