Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.1■□□□□ 0.01
R3hcc1lQ8BJM3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Gm18669-201ENSMUST00000216049 778 ntBASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
R3hcc1lQ8BJM3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
R3hcc1lQ8BJM3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
R3hcc1lQ8BJM3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
R3hcc1lQ8BJM3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
R3hcc1lQ8BJM3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
R3hcc1lQ8BJM3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
R3hcc1lQ8BJM3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
R3hcc1lQ8BJM3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms