Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2bQ8BJF9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2bQ8BJF9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2bQ8BJF9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Chmp2bQ8BJF9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chmp2bQ8BJF9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Grk6-207ENSMUST00000225925 2769 ntBASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.69■□□□□ 0.1
Chmp2bQ8BJF9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp2bQ8BJF9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms