Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Gm14859-201ENSMUST00000117752 357 ntBASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Mir3081-201ENSMUST00000175305 84 ntBASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf38Q8BI21 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf38Q8BI21 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf38Q8BI21 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf38Q8BI21 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Gm44454-201ENSMUST00000198541 138 ntBASIC14.77□□□□□ -0.05
Rnf38Q8BI21 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms