Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Atg4dQ8BGV9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Atg4dQ8BGV9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Atg4dQ8BGV9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4dQ8BGV9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms