Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smndc1Q8BGT7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Gm26039-201ENSMUST00000158152 144 ntBASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smndc1Q8BGT7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Gm11355-201ENSMUST00000121120 306 ntBASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Smndc1Q8BGT7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm9013-201ENSMUST00000132939 882 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm5587-201ENSMUST00000206270 674 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Gm10566-201ENSMUST00000086739 996 ntBASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Smndc1Q8BGT7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms