Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4bQ8BGE6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4bQ8BGE6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4bQ8BGE6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atg4bQ8BGE6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Gm37153-201ENSMUST00000193637 231 ntBASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atg4bQ8BGE6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gm18195-201ENSMUST00000207604 706 ntBASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gm7461-201ENSMUST00000058918 827 ntBASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atg4bQ8BGE6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm18489-201ENSMUST00000172565 551 ntBASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms