Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.1■□□□□ 0.01
Ubp1Q811S7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.09■□□□□ 0.01
Ubp1Q811S7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubp1Q811S7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.08■□□□□ 0.01
Ubp1Q811S7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ubp1Q811S7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.08■□□□□ 0.01
Ubp1Q811S7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ubp1Q811S7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.08■□□□□ 0
Ubp1Q811S7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.08■□□□□ 0
Ubp1Q811S7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.08■□□□□ 0
Ubp1Q811S7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Ubp1Q811S7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ubp1Q811S7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.08■□□□□ 0
Ubp1Q811S7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Ubp1Q811S7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubp1Q811S7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ubp1Q811S7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubp1Q811S7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms