Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim50Q810I2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim50Q810I2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.92□□□□□ -0.02
Trim50Q810I2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm28659-201ENSMUST00000188013 759 ntBASIC14.92□□□□□ -0.02
Trim50Q810I2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim50Q810I2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.92□□□□□ -0.02
Trim50Q810I2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim50Q810I2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.91□□□□□ -0.02
Trim50Q810I2 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.91□□□□□ -0.02
Trim50Q810I2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim50Q810I2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim50Q810I2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.9□□□□□ -0.02
Trim50Q810I2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.9□□□□□ -0.02
Trim50Q810I2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim50Q810I2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim50Q810I2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms