Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh19Q80TF3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.02■□□□□ -0
Pcdh19Q80TF3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Gm43575-201ENSMUST00000196420 516 ntBASIC15.02■□□□□ -0
Pcdh19Q80TF3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Pcdh19Q80TF3 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.02■□□□□ -0
Pcdh19Q80TF3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh19Q80TF3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdh19Q80TF3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh19Q80TF3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh19Q80TF3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Gm4995-201ENSMUST00000117247 432 ntBASIC15□□□□□ -0.01
Pcdh19Q80TF3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Gm25911-201ENSMUST00000157621 56 ntBASIC15□□□□□ -0.01
Pcdh19Q80TF3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15□□□□□ -0.01
Pcdh19Q80TF3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh19Q80TF3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.99□□□□□ -0.01
Pcdh19Q80TF3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms