Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.73□□□□□ -0.05
Rfx4Q7TNK1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Gm5417-201ENSMUST00000079706 384 ntBASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rfx4Q7TNK1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rfx4Q7TNK1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rfx4Q7TNK1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rfx4Q7TNK1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx4Q7TNK1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx4Q7TNK1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rfx4Q7TNK1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rfx4Q7TNK1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfx4Q7TNK1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms